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4R023-L3-P01-CGATGT-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L3-P01-CGATGT-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L3-P01-CGATGT-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51619278
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTTT191500.013.0816521
CTCGAAT193100.012.9977821
CTCCGAT167200.012.0089561
CTCGTAT107550.011.2721091
GTCGGTT101000.011.1122661
CTCAAAT404100.011.0392031
TCGAATG103900.010.9472712
CTCGATT99250.010.9264881
CTCGGAT251500.010.2808811
CCCGAAT107850.010.2747521
CCGCTAT31850.010.2592421
CTCAGAT344100.010.0464771
CTCATTT477650.09.9738731
CCGGGAT125700.09.9082311
CTCGGTT177000.09.71200751
CTCGACT80500.09.7065231
CGAATGT119650.09.7026493
CGATTAG92200.09.6856494
TCGTTTT224050.09.6707922
CGCTAAT27200.09.5756761
Produced by FastQC (version 0.11.5)