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4R023-L3-P03-ACAGTG-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L3-P03-ACAGTG-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L3-P03-ACAGTG-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38786765
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTTT147150.014.1262891
CTCGAAT143400.014.0334241
TATGCCG58300.013.41977644-45
CTCCGAT127950.013.3225111
TCGTATG69400.013.27076342-43
TCGAATG77750.012.0298392
CTCAAAT298650.011.6215841
CTCGATT70250.011.2562571
CGTATGC73050.010.83874542-43
CGAATGT89600.010.5962093
CTCGGAT185500.010.5676961
CTCAGAT261150.010.3893511
CTCGGTT132700.010.347871
TCGTTTT171500.010.2497812
GTCGGTT74850.010.2481871
GTCGTTT106100.010.1752091
CTGGAAT398650.010.0960391
CTCATTT366700.010.0588981
CGCGTTT20350.010.005251
TCGGTTT111100.09.8570962
Produced by FastQC (version 0.11.5)