Worg
4R023-L3-P12-ATCACG-Sequences.txt.gz_trimmed.txt FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L3-P12-ATCACG-Sequences.txt.gz_trimmed.txt

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L3-P12-ATCACG-Sequences.txt.gz_trimmed.txt
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39107352
Sequences flagged as poor quality0
Sequence length60-100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTTT136050.012.0879541
CTCGAAT140250.010.8573721
GTCGGTT76550.010.8335871
CCGCTAT24700.010.6227091
CCCGAAT87650.010.5841871
CTCCGAT123250.010.53021051
CCGGGAT104500.09.9536161
TCGTTTT165550.09.877352
GTCGTTT106300.09.7850691
CCCGTTT101000.09.6490861
CTCGTAT87700.09.5630771
TCGAATG76300.09.3339022
CGCATAT31450.09.2366671
CTCAAAT294200.09.0936371
CCGGCAT96150.09.0637491
CTGGAAT396550.09.050551
CCCAAAT251350.08.8916771
CCCGGAT144500.08.8519521
CGGCTAT43050.08.8156851
CTCGGTT131350.08.7037011
Produced by FastQC (version 0.11.5)