Worg
4R023-L3-P05-CAGATC-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L3-P05-CAGATC-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L3-P05-CAGATC-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40087754
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT148650.013.3488141
GTCGGTT74350.012.0385561
TCGAATG84900.011.9580092
CTCGTTT143600.011.7735491
CTCAAAT313200.011.5068511
TATGCCG54750.011.32885844-45
CTCGATT72550.011.227541
TCGTATG73700.010.870642-43
CGCATAT33350.010.7922331
CCGCTAT26500.010.7225711
CTCCGAT128000.010.6185581
CGCGTAA9003.8198777E-1110.5240061
CGAATGT94750.09.9707923
CTCAATT196350.09.7200331
CTCAGTT300300.09.6986961
CTCATTT368500.09.6001211
CTCGGAT190200.09.5861411
GTCGTTT108100.09.4628431
CTTTATT366600.09.3915121
TCGGTTT108300.09.3308852
Produced by FastQC (version 0.11.5)