Worg
4R023-L3-P07-ATGTCA-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L3-P07-ATGTCA-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L3-P07-ATGTCA-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35104402
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG65600.013.53787444-45
TCGACCG43150.012.57772330-31
CCCGTAT46900.012.5200621
CTCCGAT110500.010.8850161
CCCGATT50950.010.874251
CTCGAAT124850.010.430421
CGATCCG51500.010.35888382-83
CCCGAAT75000.010.039071
CCCGTTT99300.09.8713991
GTCGGTT67950.09.6868591
GTTCGAC56950.09.61269428-29
CTCGTTT121350.09.5995961
TATGCCG51650.09.32567846-47
CCCCCGT60950.09.1678171
GTCGTTT89850.09.01230051
CCGGTAT53950.08.9529541
CCCGGAT135750.08.9301291
CTCCGGT154100.08.9115451
CGCCTAT23400.08.9041911
TCGGTTT100650.08.8725922
Produced by FastQC (version 0.11.5)