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4R023-L3-P08-GTGAAA-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L3-P08-GTGAAA-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L3-P08-GTGAAA-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43391960
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT164850.012.7536471
CTCGTTT154250.011.0821081
CTCAAAT326350.011.0128181
GTCGGTT84900.010.8759531
CTCCGAT141250.010.6605351
CTCGATT80150.010.5752321
CCCGAAT90000.010.5227151
TCGAATG90400.010.4500242
CTCGGAT215650.010.2543411
CCGGGAT108350.010.2265061
CCCGATT63800.010.168111
CTCGGTT148100.010.1035121
TCGGTTT124450.09.9323162
CTCGTAT91200.09.7612031
CTCAGAT297100.09.7382041
CTCATAT181450.09.6296331
CTCCGTT149100.09.2100231
CTGGAAT439650.09.1333291
CCCGTAT50550.09.0863811
TCGTTTT182800.09.0758682
Produced by FastQC (version 0.11.5)