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4R023-L3-P10-GTGGCC-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L3-P10-GTGGCC-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L3-P10-GTGGCC-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50481795
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT196450.013.426071
TCGAATG108000.012.9686152
CTCAAAT383950.012.1604041
CTCCGAT165600.012.066961
CTCGTTT182050.011.9910151
CTCGTAT104700.011.352011
CGAATGT118100.011.182983
CTCATTT463150.010.3058691
CTCGATT98000.010.2919881
CTCAGAT350000.010.1064421
CGCGTAA9004.1836756E-109.9967041
GTCGGTT98550.09.8982031
CTCGGAT245400.09.8024561
CTGGAAT509850.09.6405251
CGATTAG89100.09.600524
CGCAATT35600.09.5769721
TCCGATT142100.09.5257572
CGCATAT36300.09.5227411
CCCGAAT100850.09.4846481
CTCGGTT169050.09.4677611
Produced by FastQC (version 0.11.5)