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4R023-L3-P10-GTGGCC-Sequences.txt.gz_trimmed.txt FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L3-P10-GTGGCC-Sequences.txt.gz_trimmed.txt

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L3-P10-GTGGCC-Sequences.txt.gz_trimmed.txt
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49951886
Sequences flagged as poor quality0
Sequence length60-100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT193300.013.0874211
CTCGTTT183200.012.6581991
TCGAATG101200.012.4064322
CTCCGAT168800.011.6565241
CTCGTAT102250.011.5001261
CTCAAAT376350.011.1658731
CTCGATT92800.010.3994761
CTCAGAT343450.010.1075731
CGAATGT116400.010.0216453
CCCGAAT106950.09.9872571
CTCGTCT232750.09.9432751
GTCGGTT98500.09.845241
CTCATTT449000.09.8287141
CTCGGAT255950.09.7924381
CCGGTTT110350.09.7219931
CCCGTTT123600.09.6652681
CGCATAT37900.09.5179561
CCGCTAT33650.09.467081
CTCGGTT170800.09.4080241
CGCGTAA9551.4897523E-99.3205691
Produced by FastQC (version 0.11.5)