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4R023-L4-P2-TTAGGC-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L4-P2-TTAGGC-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L4-P2-TTAGGC-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39459254
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT141100.014.9946321
TCGAATG81950.013.1347622
CTCGATT68750.012.9031831
CTCAAAT311100.011.8328591
CTCCGAT114050.011.5631841
CGAATGT85900.011.5458243
CTCGTTT142200.011.5426221
CGCGTTT21500.011.2527751
CGCGTAA16850.010.416691
CGCTAAT22400.010.37711
CGCAATT27000.010.3661191
CTCATTT373100.010.3496851
CTCGTAT83950.010.34091
CGCATTT64500.010.29665851
CTCGGAT179300.09.9479941
CTCAATT203350.09.8678871
CTTCGAT105800.09.7745951
CGCATAT32100.09.7536431
CTCAGAT271550.09.6081741
CTCAGTT311100.09.57607651
Produced by FastQC (version 0.11.5)