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4R023-L4-P3-ACAGTG-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L4-P3-ACAGTG-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L4-P3-ACAGTG-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38094719
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG118350.024.43741242-43
TATGCCG100500.023.96215244-45
CGTATGC120600.020.04626842-43
ATGCCGT161800.018.00599546-47
GTATGCC169500.017.39570644-45
GCCGTCT173500.016.8052748-49
CTCGAAT146450.016.4530681
CTCGTAT149100.016.1197640-41
TCGAATG82650.015.0708842
TCTCGTA171550.014.74978240-41
TGCCGTC182650.013.44220846-47
CGAATGT89650.012.8979453
CTCGTTT140800.012.5317831
CTCAAAT294750.012.23016551
CGCTATT20000.011.8580321
CTCGATT64550.011.7569941
GATCTCG217500.011.70933138-39
CTCCGAT118250.011.6324021
CCGCTAT22950.011.3671761
CGCGTTT22250.011.085261
Produced by FastQC (version 0.11.5)