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4R023-L4-P4-GCCAAT-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L4-P4-GCCAAT-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L4-P4-GCCAAT-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47697979
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT186700.012.7539761
TCGAATG102500.011.5101542
CTCGTTT171850.011.4823271
CTCCGAT154750.011.2491991
GTCGGTT95300.011.1491381
CTCGATT85750.010.5100711
CGCGTAA10001.8189894E-1210.4353931
CCGGGAT122450.09.9941781
CTCAAAT356600.09.9762221
CCGGTTT112500.09.9505181
CCGGTAT60250.09.8409991
CGATTAG81200.09.6667974
CCCGAAT101250.09.6506891
CCGGCAT113700.09.6369081
CTCGTAT111800.09.5036941
CCGGGTT133750.09.3980611
CTCGGAT229150.09.3977131
CCGCTAT31400.09.3658721
CTCAGAT324450.09.2981271
CTCGGTT156850.09.2538621
Produced by FastQC (version 0.11.5)