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4R019-L5-P1-ATCACG-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Fri 14 Apr 2017
4R019-L5-P1-ATCACG-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R019-L5-P1-ATCACG-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49833811
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT200100.013.7433991
TCGAATG105900.011.9757242
CTCGTTT180250.011.3709451
CCGCTAT40200.011.1092041
CTCAAAT377150.011.0185261
CTCCGAT149650.010.8060521
GTCGGTT106650.010.2702361
CCCGTAT69250.010.1825571
CGAATGT122100.09.8094083
CGGGAAT90950.09.4587511
CTCGGAT242050.09.4387951
CTCATAT202350.09.4320961
CCGGCAT135550.09.3984261
CCGCAAT54750.09.2731011
TCGTTTT229950.09.25334552
GTCGTTT146850.09.1874141
CCCGAAT105950.09.0957451
CTCGTAT138200.08.9801021
TCGTATC80800.08.952482
CGCTAAT41850.08.8739511
Produced by FastQC (version 0.11.5)