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4R019-L5-P5-CAGATC-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R019-L5-P5-CAGATC-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R019-L5-P5-CAGATC-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42896014
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATCCG60300.013.67035182-83
GTCGGTT88750.012.9773421
CCCGAAT84850.012.9089851
GTCCGTT69300.012.8208441
TCGACCG67200.012.51111530-31
GTCCGGT58300.012.175771
CTCCGAT126050.012.1207231
CTCCGTT152750.012.0640431
GTTCGAC71000.011.97381328-29
CTCCGGT165550.011.7275931
GTCGTTT130350.011.7208831
CCCGTAT56350.011.5960191
CGACCGT65300.011.36466532-33
CCCGGAT162400.011.1445551
CCCGATT57900.010.9608251
TATGCCG59000.010.94620244-45
CCCGGTT94550.010.8388451
ACGTTCG36400.010.8012276
CGCTAAT48000.010.773071
CTCGTTT167650.010.739481
Produced by FastQC (version 0.11.5)