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4R019-L5-P6-TAGCTT-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R019-L5-P6-TAGCTT-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R019-L5-P6-TAGCTT-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82843628
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT350400.014.6351891
TCGAATG183900.013.8438052
CTCCGAT270100.012.8778931
CTCGTTT317300.012.3399281
CGAATGT209200.012.0792563
CGCGTAA27500.011.9647321
CTCAAAT661500.011.7386421
GTCGGTT181450.011.6830771
CTCGATT134200.011.5934621
CGATTAG147150.010.7569134
CTCATTT770550.010.5836711
CTCCTAT292550.010.52395251
ACGATAC97200.010.48664860-61
CTCGTAT212600.010.1923731
CTCGGAT402800.010.14071
TCGTTTT401550.010.0950642
TCGGTTT233700.010.069712
CTCGTCT398000.09.8850771
CGCGTTT48000.09.7925641
CTCAGTT619100.09.7637761
Produced by FastQC (version 0.11.5)