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4R024-L6-P9-GTGAAA-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Mon 17 Apr 2017
4R024-L6-P9-GTGAAA-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R024-L6-P9-GTGAAA-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40354557
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGAATG90600.013.1758692
CTCGAAT186350.013.1118851
CGCGTAA7350.012.9101091
CTCCGAT131250.012.4711661
CGATTAG66350.011.8287714
CTCGTAT95700.011.4025811
CGAATGT108400.010.9253493
ACGATAC49350.010.90611760-61
CTCGTTT160200.010.8986471
CCCGTTT103800.010.6041991
CTCGGAT201350.010.4385311
CCCGAAT85200.010.3576361
CCCGGAT145300.010.3509671
CTCGATT58650.010.2736081
GTCGTTT126300.010.2176931
CTCAAAT323750.010.0384831
GTCGGTT92100.09.9937711
TCCGATT127450.09.8456692
CTCGGTT128750.09.6547571
CCGCTAT32900.09.5177731
Produced by FastQC (version 0.11.5)