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4R024-L7-P9-GTGGCC-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Mon 17 Apr 2017
4R024-L7-P9-GTGGCC-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R024-L7-P9-GTGGCC-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46318391
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG63250.017.75640148-49
CCCGTAT68600.015.1478161
CCCGTTT135050.014.7916791
TCGTATG96550.014.69811844-45
GTCGTTT146500.014.1538241
CCCGGAT194900.014.022991
GTCGGTT112450.013.9246571
CCCGAAT106450.013.8180261
CCCGTCT186450.013.2333851
CTCGTTT168450.012.9292011
GTCCGTT77750.012.7548671
CCCGATT72050.012.3150911
CTCCGTT177300.012.230311
TATCTCG102500.012.05700440-41
CCGTATT71550.011.8258382
CCCGTGT131200.011.53683951
CTCGAAT249300.011.4769121
CTCCGAT174250.011.4096211
TCGGTTT141400.011.336372
TCGTATC97550.011.3242552
Produced by FastQC (version 0.11.5)