Worg
4R024-L7-P9-GTGGCC-Sequences.txt.gz_trimmed.txt FastQC Report
FastQCFastQC Report
Mon 17 Apr 2017
4R024-L7-P9-GTGGCC-Sequences.txt.gz_trimmed.txt

Summary

[OK]Basic Statistics

MeasureValue
Filename4R024-L7-P9-GTGGCC-Sequences.txt.gz_trimmed.txt
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45738222
Sequences flagged as poor quality0
Sequence length60-100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGTAT65550.016.9254071
TATGCCG59100.016.74693748-49
TCGTATG86650.015.33730144-45
GTCGTTT147900.015.1927571
CCCGTTT131200.015.1641691
CCCGGAT183600.014.9413021
CCCGTCT183800.013.524231
CCCGAAT104650.013.4197851
GTCGGTT105600.013.2547271
TATCTCG96650.012.418776540-41
CTCCGTT173900.012.3021241
CCCGTGT127800.012.2709291
CCGTATT67550.012.1276382
GTCCGTT78800.011.7625771
CCCGGTT118200.011.6041581
CCCGATT71600.011.4416481
TCGGTTT130450.011.2680582
TCGAATG93400.011.1769042
CTCGAAT247750.011.091441
CTCCGAT174150.010.8329091
Produced by FastQC (version 0.11.5)