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4R023-L2-P02-CGATGT-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Fri 14 Apr 2017
4R023-L2-P02-CGATGT-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L2-P02-CGATGT-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49471553
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGAATG108500.013.1254942
CTCGAAT226200.012.7590041
CTCGTTT186800.012.4770071
CTCAAAT393550.011.3982371
GTCGGTT109100.011.2688821
GTTCGAT88300.011.1817171
CTCGTAT117950.011.1075161
CGAATGT128550.010.7858423
CTCCGAT157200.010.6592831
CTCGATT80750.010.5812221
ACGATAC62300.010.296802560-61
GTCGTTT145300.010.258171
TTCGATT94500.010.2456192
TCGTTTT237550.09.99169352
CGATTAG80000.09.8700224
CTCGGAT250750.09.7114091
CCCGTTT125600.09.6751161
CTCGGTT156550.09.581641
CCGCTAT39850.09.5294431
TCGGTTT137950.09.5057262
Produced by FastQC (version 0.11.5)