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4R023-L2-P04-GCCAAT-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Fri 14 Apr 2017
4R023-L2-P04-GCCAAT-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L2-P04-GCCAAT-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38303601
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT169050.011.9043361
TCGAATG82000.011.5783752
CTCGTTT143400.011.3527071
GTCGTTT120200.010.9772831
GTCGGTT90250.010.6758711
TCGTTTT185550.010.6389422
CCCGTAT52150.010.3754041
CTCCGAT124250.010.3520741
CCCGAAT80750.010.2273041
CCCGATT53950.010.1172131
CCGCTAT31350.09.8407971
CGAATGT100050.09.7714153
CGCCTAT22300.09.577721
CGCTAGT18400.09.5441741
CGCGAAC21200.09.5332882
CCCGGAT141950.09.4959291
CTCGGAT194150.09.43635751
CTCGTAT102950.09.4049881
CTCAAAT299800.09.4039291
CTCGGTT124550.09.3363441
Produced by FastQC (version 0.11.5)