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4R023-L2-P05-CAGATC-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L2-P05-CAGATC-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L2-P05-CAGATC-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51549752
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT242450.012.7647341
TCGAATG116700.012.6064082
CTCGTTT200450.012.455641
CTCCGAT166300.011.5883121
CGAATGT132100.011.2079793
GTCGGTT113150.011.0747961
CCCGTAT69550.010.9196621
CTCAAAT402200.010.68053151
TCGTTTT255550.010.5757182
CTCGTAT124900.010.450971
CCCGAAT112750.010.4405051
TCGGTTT141700.010.2495912
ACGATAC65550.010.180593560-61
CCCGTTT135650.09.9026861
CGATTAG85850.09.8547864
GTCGTTT165700.09.8255751
CTCGATT81050.09.7216831
CGCATAT35200.09.574191
CTCCGTT175600.09.5149071
CTCATTT467350.09.3947631
Produced by FastQC (version 0.11.5)