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4R023-L2-P12-GATCAG-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L2-P12-GATCAG-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L2-P12-GATCAG-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32902720
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT147500.013.1285971
TCGAATG71200.012.2122082
CTCGTTT123200.011.4418421
CTCGTAT84750.011.1445771
GTCGTTT103100.011.1405571
GTCGGTT75850.011.138191
CGCTAGT14600.011.05291
CTCCGAT106000.010.9700961
CTCAAAT258000.010.8354211
CGAATGT82350.010.5587353
TCGGTTT92400.010.4275992
CCCGAAT67200.010.3824131
CTCGATT50900.010.2571131
CGCGATA18550.010.13364694
CGCGATT7502.482011E-810.1253241
CTCCGTT113950.010.0381321
CCCGTTT84300.010.02172851
GTTCGAT57800.010.0180261
CGATTAG54350.09.9448174
TCGTTTT157450.09.9404042
Produced by FastQC (version 0.11.5)