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4R023-L2-P07-ATGTCA-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L2-P07-ATGTCA-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L2-P07-ATGTCA-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46429974
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG86400.015.96278144-45
TATGCCG67000.014.76330546-47
CTCGAAT191600.011.9888521
CCCGTTT129850.011.6959571
CTCGTTT165250.011.4306091
CCCGAAT100550.011.3280951
CTCCGAT141700.010.6843611
TCGAATG94450.010.5992112
AATCTCG107400.010.58798740-41
GTCGTTT136050.010.5699231
CGCGTTT28550.010.306551
CCCGATT65450.010.0793581
GTCGGTT106200.09.8316381
CGATTAG63150.09.82420354
TCGTTTT214450.09.7747272
CCGCTAT39400.09.7570061
CTCAAAT340000.09.7432581
CCCGGAT184200.09.6105211
CTCGGAT233300.09.5815091
CTCGTAT136800.09.50587751
Produced by FastQC (version 0.11.5)