Mouse Liver Pairwise Comparison - Analysis Results
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This section provides the identifiers and notations used to report the analysis results on this website.
It also provides a description of some parts of the analysis and some comments that may help understand the results.

Analysis Procedure

  • Detecting Oscillation
    Detecting oscillating transcripts (P-Value, Q-Value, Period, Amplitude, Lag) was done via:
    BioCycle
  • Functional Analysis
    Functional Analysis was performed using GO Terms
    Please click on links under tab for detailed reports of GO Terms for oscillating transcripts.
  • TFBS Enrichment
    TFBS Enrichment was performed using MotifMap and CHiPSeq experiments obtained from ENCODE
    Please use table to see specific experiment identifiers.
  • Visualization
    Please visit Circadiomics for transcript visualization.
    Select Transcriptome
    Datasets:
    mouse_morning_exercise
    mouse_morning_sedentary
    mouse_evening_exercise
    mouse_evening_sedentary

Venn Diagrams

Circadian Transcripts


Phase Analysis





Radar Graphs

Alone


Both



Data Download

Data Visualization

Pathway Enrichment

Data Download

Pathway Enrichment

Downsteam Analysis





Venn Diagrams

Circadian Metabolomics


Phase Analysis





Radar Graphs



Data Download

  • Dataset: Table
  • Dataset: Table
  • Dataset: Table
  • Dataset: Table

  • Circadian metabolomics condition 1: Table
  • Circadian metabolomics condition 2: Table
  • Circadian metabolomics in both: Table

Data Visualization


Pathway Enrichment

Changed

Increased

Decreased

Data Download

Changed

Increased

Decreased

Pathway Enrichment

LP

DP

Data Download

LP

DP