Ocular Dominance Analysis

Comparison to MiRNA Profiles in Mouse Brain

He, Miao, et al. "Cell-type-based analysis of microRNA profiles in the mouse brain." Neuron 73.1 (2012): 35-48.

Venn Diagrams - Overlap with Differentially Expressed Cell-Type MiRNA Lists

MicroRNA Target Enrichment

Top 3 microRNA (by p-value) for each comparison are shown.
If the MicroRNA is upregulated in second condition,
then we check if the targets of that MicroRNA are enriched in the down regulated differentially expressed genelist.
(And vice-versa for for downregulated MicroRNA)
MicroRNA CyberT P-Value Enriched P-Value OddsRatio Direction
Mir132 2.21535609917e-05 1.82973026956e-27 2.9016759516 Down in P28-KO
Mir212 0.000151462987987 2.23594106337e-25 2.8148654465 Down in P28-KO
Mir7052 0.00126228513944 0.979833037891 0.698124709032 Down in P28-KO

Possible Repressor List (106 Genes)

These are miR-132 targets (only Transcription Factors) common to all crosses found to be up in KO condition.
Below list is a table detailing GO Biological Process Enrichment.

Psip1 Med13l Prrx1 Rybp Kdm5a Kdm5b Arid5b
Pnrc2 Csrnp3 Mynn Rb1cc1 Topors Nfib Mapk1
Zfp719 Dhx33 Dhx36 Sox5 Fbxw11 Ciita Zfp568
Skil Cebpz Has3 Zfp712 Hinfp Zfp652 Pkn2
Tcerg1 Spen Zfp354c Foxp1 Phf20 Mycbp2 Phf8
Jmjd1c Phf14 Map3k9 Nfe2l2 Camta1 Taf4b Hdac2
Elf1 Pdpk1 Pdcd4 Bnc2 Whsc1l1 Tlr2 Trp53inp1
Zfp748 Gabpb2 Zfp800 Taf1d Whsc1 Rb1 Zkscan1
Runx1t1 Bbx Jmy Hmbox1 Smad4 Arid2 Notch2
Insr Ralgapa1 Esrrg Cir1 Bmi1 Ikbkg Pik3r1
Lcor Ddx17 Zhx1 Tef Bdp1 Ikzf5 Ern1
Wwp1 Rfc1 Prkaa2 Mef2c Zfp516 Chaf1b Ascc3
Arid4b Hmg20a Zfp455 Ahr Ddx3x Nck1 Pspc1
Khdrbs2 Foxo1 N4bp2l2 Elk4 Zfp664 Rorb Tpr
Zbtb33 Chd1 Chd6 Mecp2 Aff4 Gli3 Satb2
Satb1

Repressor GO Enrichment

GO Biological Process Pos/Neg Enrichment Fold P-Value
Palate development + > 5 1.24e-03
Cell cycle arrest + > 5 2.51e-02
Negative regulation of transcription from rna polymerase ii promoter + > 5 5.70e-23
Negative regulation of transcription, dna-templated + > 5 1.96e-30
Histone modification + > 5 6.68e-06
Negative regulation of nucleic acid-templated transcription + > 5 3.69e-30
Covalent chromatin modification + > 5 7.54e-06
Negative regulation of rna biosynthetic process + > 5 6.33e-30
Chromatin modification + > 5 2.57e-10
Negative regulation of rna metabolic process + > 5 3.07e-29
Transcription, dna-templated + > 5 1.64e-61
Nucleic acid-templated transcription + > 5 1.71e-61
Rna biosynthetic process + > 5 2.27e-61
Negative regulation of cellular macromolecule biosynthetic process + > 5 1.82e-29
Chromatin organization + > 5 4.63e-11
Negative regulation of macromolecule biosynthetic process + > 5 1.44e-28
Negative regulation of nucleobase-containing compound metabolic process + > 5 2.01e-27
Negative regulation of nitrogen compound metabolic process + > 5 4.55e-27
Negative regulation of cellular biosynthetic process + > 5 8.61e-28
Negative regulation of gene expression + > 5 1.78e-28
Rhythmic process + > 5 1.24e-02
Nucleobase-containing compound biosynthetic process + > 5 1.11e-57
Negative regulation of biosynthetic process + > 5 1.91e-27
Heterocycle biosynthetic process + > 5 1.01e-56
Transcription from rna polymerase ii promoter + > 5 2.55e-13
Aromatic compound biosynthetic process + > 5 1.34e-56
Cellular nitrogen compound biosynthetic process + > 5 1.31e-55
Regulation of transcription, dna-templated + > 5 8.15e-82
Positive regulation of rna biosynthetic process + > 5 2.56e-26
Regulation of transcription from rna polymerase ii promoter + > 5 6.51e-34
Regulation of nucleic acid-templated transcription + > 5 1.28e-81
Regulation of rna biosynthetic process + > 5 1.57e-81
Organic cyclic compound biosynthetic process + > 5 4.11e-55
Positive regulation of rna metabolic process + > 5 7.02e-27
Response to growth factor + > 5 2.51e-02
Positive regulation of nucleic acid-templated transcription + > 5 3.10e-25
Positive regulation of transcription, dna-templated + > 5 3.10e-25
Regulation of rna metabolic process + > 5 3.01e-80
Positive regulation of nucleobase-containing compound metabolic process + > 5 6.11e-29
Positive regulation of nitrogen compound metabolic process + > 5 1.52e-28
Positive regulation of macromolecule biosynthetic process + > 5 2.36e-26
Regulation of cellular macromolecule biosynthetic process + > 5 8.55e-78
Positive regulation of transcription from rna polymerase ii promoter + > 5 3.37e-14
Chromosome organization + > 5 4.62e-10
Rna metabolic process + > 5 1.22e-52
Cellular macromolecule biosynthetic process + > 5 1.55e-52
Positive regulation of gene expression + > 5 1.57e-25
Regulation of macromolecule biosynthetic process + > 5 1.59e-76
Macromolecule biosynthetic process + > 5 3.07e-52
Regulation of nucleobase-containing compound metabolic process + > 5 3.41e-76
Regulation of nitrogen compound metabolic process + > 5 2.20e-75
Positive regulation of cellular biosynthetic process + > 5 9.12e-25
Positive regulation of biosynthetic process + > 5 2.17e-24
Regulation of cellular biosynthetic process + > 5 3.11e-74
Regulation of gene expression + > 5 5.40e-74
Regulation of biosynthetic process + > 5 1.21e-73
Gene expression + > 5 1.94e-50
Nucleic acid metabolic process + > 5 5.75e-49
In utero embryonic development + > 5 1.90e-02
Negative regulation of macromolecule metabolic process + > 5 1.21e-24
Cellular response to oxygen-containing compound + > 5 1.09e-03
Negative regulation of cellular metabolic process + > 5 6.50e-24
Skeletal system development + > 5 2.98e-02
Cellular biosynthetic process + > 5 3.91e-46
Organic substance biosynthetic process + > 5 4.04e-45
Nucleobase-containing compound metabolic process + > 5 7.36e-45
Negative regulation of metabolic process + > 5 7.51e-23
Biosynthetic process + > 5 2.26e-44
Heterocycle metabolic process + > 5 1.58e-43
Cellular aromatic compound metabolic process + > 5 3.34e-43
Cellular nitrogen compound metabolic process + 4.85 7.94e-42
Positive regulation of macromolecule metabolic process + 4.83 1.23e-21
Organic cyclic compound metabolic process + 4.80 1.83e-41
Chordate embryonic development + 4.74 1.15e-02
Positive regulation of cellular metabolic process + 4.70 3.37e-22
Embryo development ending in birth or egg hatching + 4.69 1.30e-02
Negative regulation of cell death + 4.62 4.48e-04
Nitrogen compound metabolic process + 4.62 6.18e-42
Regulation of macromolecule metabolic process + 4.61 6.37e-60
Regulation of primary metabolic process + 4.60 6.92e-60
Apoptotic process + 4.55 1.34e-03
Cellular response to endogenous stimulus + 4.55 4.35e-02
Programmed cell death + 4.43 1.97e-03
Regulation of cellular metabolic process + 4.40 5.62e-58
Negative regulation of apoptotic process + 4.29 1.59e-02
Circulatory system development + 4.26 3.86e-02
Cardiovascular system development + 4.26 3.86e-02
Cell death + 4.25 3.55e-03
Negative regulation of programmed cell death + 4.22 1.95e-02
Death + 4.22 3.90e-03
Organ morphogenesis + 4.20 9.09e-03
Positive regulation of metabolic process + 4.07 1.22e-19
Epithelium development + 3.97 1.91e-02
Negative regulation of signal transduction + 3.95 2.02e-02
Regulation of metabolic process + 3.92 4.82e-53
Cellular macromolecule metabolic process + 3.90 1.21e-43
Embryo development + 3.83 1.44e-02
Cellular response to stress + 3.82 7.73e-04
Macromolecular complex subunit organization + 3.78 1.85e-06
Regulation of apoptotic process + 3.76 4.69e-04
Regulation of cell death + 3.75 1.07e-04
Negative regulation of cellular process + 3.74 7.06e-21
Regulation of programmed cell death + 3.71 5.81e-04
Cellular response to organic substance + 3.57 9.31e-03
Tissue development + 3.52 7.20e-04
Negative regulation of biological process + 3.50 8.62e-20
Macromolecule metabolic process + 3.49 2.00e-39
Regulation of cell proliferation + 3.44 4.30e-03
Regulation of multicellular organismal development + 3.36 8.50e-04
Positive regulation of cellular process + 3.33 1.43e-18
Cellular response to chemical stimulus + 3.29 2.41e-03
Response to external stimulus + 3.19 4.80e-02
Regulation of cell differentiation + 3.15 1.74e-02
Cellular protein modification process + 3.14 1.29e-04
Protein modification process + 3.14 1.29e-04
Macromolecule modification + 3.07 1.07e-04
Positive regulation of biological process + 3.00 1.60e-16
Cellular metabolic process + 2.99 1.78e-33
Primary metabolic process + 2.89 3.43e-32
Regulation of developmental process + 2.86 2.97e-03
Regulation of signal transduction + 2.81 1.35e-03
Organic substance metabolic process + 2.78 1.07e-30
Organelle organization + 2.72 1.54e-03
Organ development + 2.66 2.67e-03
Regulation of cell communication + 2.64 1.75e-03
Response to stress + 2.63 5.71e-03
Regulation of multicellular organismal process + 2.61 1.03e-02
Metabolic process + 2.57 1.20e-27
Regulation of signaling + 2.57 5.51e-03
Cellular protein metabolic process + 2.56 5.93e-03
Cellular component organization + 2.36 6.59e-05
System development + 2.31 3.66e-03
Cell differentiation + 2.30 2.39e-02
Cellular component organization or biogenesis + 2.28 1.86e-04
Regulation of response to stimulus + 2.28 4.17e-02
Regulation of cellular process + 2.25 2.41e-29
Multicellular organismal development + 2.22 1.69e-03
Single-organism developmental process + 2.21 1.28e-04
Developmental process + 2.19 1.52e-04
Regulation of biological process + 2.16 1.25e-27
Anatomical structure development + 2.14 4.49e-03
Biological regulation + 2.07 8.21e-26
Cellular process + 1.58 7.09e-11

miR-132 Targets Intersected with Up/Down Gene Lists



miR-132 Enrichment in Gene List
MicroRNA Enriched P-Value OddsRatio Direction
Mir132 2.43568184168e-13 2.03248610855 Down in P28-KO


Gene Targets Down in KO: 116

*Med9 *Dnmt3a Ankrd40 Snx11 Dynll2 Rassf3 Hn1 *Ss18
Rpp14 Dcaf8 Mbp Zfp362 Map4k4 1700047m11rik Snx11 Actr3b
Nsg2 Rnf135 Rnf220 Fbxo9 Dpp3 1110004e09rik Tomm40l Ankrd40
Hkdc1 Fbxw2 Flot1 Fn3krp Stard3 *Dedd Epdr1 Kctd14
Lysmd4 Pamr1 Cercam *Zbtb24 Trpm1 *Batf3 Fnbp1 Ubtf
Trim26 Gsta3 Rimkla Neu4 2610206c17rik Papd7 Me3 Ipo9
Frmd5 *Dnmt3a Glyctk Dcun1d2 Hnrnpm Phlda3 Rnaseh2c Arf1
Mkrn1 Cd300lf Nav2 Abcc5 Sept5 Rab40c Rnf146 Wscd1
Nit1 Brap Brd1 *Pbx4 Gdi1 Kbtbd4 Rnps1 Mical3
Klc4 Chka *Thap11 Adamts3 Lnx1 Slc16a6 Prpf38b Stx1a
Pafah2 *Sox13 *Litaf Dusp10 Ranbp3 *Yeats2 *Zfp664 Frat1
Rftn1 Fam114a2 *Il1a Abcc1 Repin1 Gnl1 Kctd6 9630033f20rik
Kctd8 *Bcl11a Xkrx Bicd2 Cygb Hn1 Wif1 Nol9
Dcaf8 Mlf2 Map4k4 Snn *Ss18 *Ccnt2 Il18bp *Med9
Ccdc114 *Med22 Zfp362 Fam134a

Gene Targets Up in KO: 183

*Chd1 Cblb Tada2b Clmn Rnf150 Tmem2 Rasa1 Sos1
Acsl3 Calu *Rb1 Pten *Zfp516 Dcun1d3 *Runx1t1 B630005n14rik
Daam1 Dusp9 *Mecp2 *Jmy Itch *Arid2 Plcxd2 Nhsl2
*Foxo1 Pik3ca Lrrc58 Mmp16 Zfp704 Zfp644 D15ertd621e *Mapk1
Dcun1d4 Mia3 Gpd2 Slc8a1 Eif5a2 Fbxl20 Trove2 *Sox5
Ptgs2 Paqr3 Fubp1 Zc3h6 Rbm27 Glul Cntn1 *Ikzf5
Rab15 *Zfp712 Ankrd44 Atp6v1a *Zfp800 Gkn1 *Pkn2 *Rfc1
Adamts12 Pten Dcun1d3 Htr5a Lrrc4c *Ddx3x Tspyl5 Daam1
Popdc3 Nup153 Dnajc13 Ints12 Bcl2l11 Plk4 Bmpr1b *Mapk1
Gpd2 *Prrx1 *Dhx36 Hspb7 Dcaf12l1 Robo1 Tdrd7 Lamp2
Me2 Rnf150 Pja2 Arl5b Pcdh9 Fn1 H2-t24 Mfhas1
Gm3414 Gpc3 Vgll3 Actr2 *Zfp748 Adra1a Asb3 *Arid2
Ankfy1 Cxcr4 Yod1 Fam73a Vcam1 *Phf8 Pot1a Cdkal1
Gm4890 Tnpo1 *Nfe2l2 E230029c05rik 4932438a13rik Bmper Eif5a2 Fam126a
Plxnc1 Mdc1 Timp3 Ppp2r2a Zfp804a *Tlr2 *Gli3 *Trp53inp1
Magt1 Cltc Slc16a9 Adamts2 Calu *Rb1 1700109k24rik *Zfp516
*Runx1t1 Reln Il17rd 1700086l19rik Bbs9 Sos1 *Hmbox1 A630020a06
Cbll1 Mctp1 Fam184a Ptpn20 B3galt1 Gabrg1 Lrrn1 Rftn2
D15ertd621e Utrn *Ikbkg Cldn1 Arhgap29 Nhlrc2 Fkbp15 Crkl
*Ciita Akap11 Celf2 Prkx Cald1 Sv2b Gulp1 Cd55
Ccny Dusp9 Fam169a Usp24 Iqgap1 Xkr4 Ppp1r3c Itch
Atp8a2 Man2a1 Flrt3 Trpc1 Lnpep *Topors E430025e21rik Agl
Prex2 Zfp644 Slc35a5 Fbxo30 Mia3 *Sox5 Nupl1

DAVID Enrichment

Please Click on the link for the full DAVID Enrichment reports and pie charts

Up in KO

Enriched DAVID Pathways on Genes Up in KO

Enriched DAVID Term Clusters For Genes Up in KO

Termname Foldenrichment Easebonferroni Afdr Benjamini Bonferroni Ease Fisher
Phosphoprotein 1.3581591870515088 4.7781785694756e-07 4.415172816241153e-06 1.1216283088977264e-06 1.1216283088977264e-06 3.232360067305254e-09 2.342244982975044e-09
Brain 1.3296120325221246 9.964594506195468e-07 1.181010054196463e-05 1.6537341350764123e-06 1.6537341350764123e-06 9.670967822341175e-09 7.168776600975159e-09
Membrane 1.3691549400726493 6.311701156613836e-06 5.888326443104219e-05 7.4793158745256605e-06 1.495857580879889e-05 4.310860917122128e-08 3.093980870315021e-08
Glycoprotein 1.432508853474989 0.000287177299924668 0.0028130082801447465 0.00023818018444254907 0.0007143703774387111 2.0594378261937113e-06 1.4079330442078817e-06
Head 1.7096058875582423 0.0004962658191327574 0.007709178883608114 0.000539622554804331 0.001078953917106995 6.3130584755321755e-06 3.5711375066840468e-06
Go:0042995~cell projection 2.2431493708733026 0.0008228073499486621 0.014876002213748407 0.0034749670192630866 0.0034749670192630866 1.1050792085321833e-05 4.676955209095389e-06
Mmu05221:acute myeloid leukemia 6.06425702811245 0.0009275941571477153 0.03527624374285443 0.004300138641810891 0.004300138641810891 2.9719633043268618e-05 4.180282428502118e-06
Mmu05200:pathways in cancer 2.568391211906449 0.001715198154799702 0.0502972864833362 0.0030677202512674473 0.006126029594994753 4.23775206761046e-05 1.5465383034119154e-05
Go:0005886~plasma membrane 1.4055062443674484 0.005169993413639551 0.05708574197867966 0.0066582426788615034 0.013272153162152356 4.2415022121777113e-05 2.9450725816425853e-05
Alternative splicing 1.3096064747926393 0.00919325664453663 0.0826286090906958 0.005236148117343409 0.020780662478094847 6.0515803233370305e-05 4.52723840948206e-05
Go:0044459~plasma membrane part 1.5577426186620158 0.013426821982680859 0.16643696356660742 0.012908027447046888 0.038226381522456276 0.00012372624952171416 7.680260070465369e-05
Go:0016337~cell-cell adhesion 2.6918776139115126 0.12636463293275435 0.6785710513359744 0.5521164472120776 0.5521164472120776 0.0003952083054654495 0.0001364474483118469
Go:0035295~tube development 2.540062967335695 0.118344345517715 0.889918924346611 0.40977849984139725 0.6516385807505285 0.0005188194891772874 0.0001908207514435265
Lung 1.5712478072067406 0.07923425999819522 1.1667612049536258 0.05330625859713323 0.15154557695774773 0.0009605846031305227 0.0005937059101766707
Metal-binding 1.3526119236699734 0.13665108307757956 1.3593020209399342 0.06717438754751948 0.2936786893572866 0.001001472343666137 0.0007200169507066707
Embryonic tail 2.1686456524008846 0.061928578080082786 1.27078778144335 0.04378385337238555 0.16396532271373387 0.001046733585675848 0.0004598164829391449
Mmu05220:chronic myeloid leukemia 4.093373493975903 0.09760556234292328 1.6604838473034178 0.06589979623458297 0.18495722779673496 0.001409451897936258 0.00030837154942603445
Go:0048732~gland development 2.687322829454809 0.2784617407374804 2.439570383626033 0.6213699993841639 0.945719346640493 0.00143282459575849 0.0004943775653972798
Vagina 2.720499202879415 0.09403338742367051 2.4789802087961554 0.0678858019843318 0.2963679450806064 0.0020534426481275897 0.0007101996677350427
Go:0048589~developmental growth 3.5293506493506497 0.7071707960256741 3.5026911514819403 0.6505990824328843 0.985096229146801 0.0020678104179423593 0.000531532176530624
Go:0010604~positive regulation of macromolecule metabolic process 1.7841899017254468 0.31095752874064375 3.5186899283807582 0.5705028684051485 0.9853849152306832 0.0020774164805314084 0.0011280068607714586
Go:0043086~negative regulation of catalytic activity 3.4944065835154943 0.8190222024873085 3.747450031876376 0.5280849591249017 0.9889545626574422 0.002214934077854517 0.0005753835349913063
Zinc 1.3954743063799944 0.3284940510023183 3.7500052825101826 0.14941303265843475 0.6212851410161777 0.002794278077471852 0.0019502154801517278
Mmu05222:small cell lung cancer 3.65995747696669 0.14652664843560137 3.3790377595907084 0.09964188387438655 0.3428551099311612 0.002891334445505368 0.0007134433951410144
Brain cortex 1.8199311412236647 0.18967409630396137 3.483687381339051 0.0794203570415869 0.3913491933682508 0.0028993592647546754 0.001511940483266496

Down in KO

Enriched DAVID Pathways on Genes Down in KO

Enriched DAVID Term Clusters For Genes Down in KO

Termname Foldenrichment Easebonferroni Afdr Benjamini Bonferroni Ease Fisher
Mammary tumor 1.5599541535344534 2.962370571069073e-08 4.160931821317604e-07 5.854752604950164e-08 5.854752604950164e-08 3.403926166555154e-10 2.1312015740983578e-10
Phosphoprotein 1.2469636665055663 5.6416137355075335e-06 5.030773170267011e-05 1.4056572331333506e-05 1.4056572331333506e-05 3.6228533201066755e-08 2.7655046867532997e-08
Embryo 1.5271916676275028 2.536290048482659e-05 0.0003528930978657918 2.4827129176063778e-05 4.96536419658522e-05 2.8869109061111374e-07 1.8246920734632763e-07
Coiled coil 1.5145472862426153 0.00017478882568000564 0.0019138150259556674 0.00026733985021587525 0.0005346082298361976 1.378223750715351e-06 8.56882490863415e-07
Liver 1.3515646258503402 0.00020890807732110162 0.0024792239882054368 0.00011627667493152583 0.0003487894655712642 2.0281974011259903e-06 1.5030916880267353e-06
Bone marrow 1.598829084222117 0.00022246157949989964 0.0033188467495559593 0.00011674197152222732 0.000466886120325416 2.7150843698841516e-06 1.600619781991398e-06
Go:0005794~golgi apparatus 1.8779936461388074 0.00033709803031378716 0.005300460887869285 0.0014962224965829884 0.0014962224965829884 3.8100257068203898e-06 1.9156507822913833e-06
Go:0043228~non-membrane-bounded organelle 1.4592886920270973 0.0010583155903444164 0.006337822256330394 0.0008947991978854875 0.0017887977301663804 4.555713641295025e-06 3.0081659348632982e-06
Go:0043232~intracellular non-membrane-bounded organelle 1.4592886920270973 0.0010583155903444164 0.006337822256330394 0.0008947991978854875 0.0017887977301663804 4.555713641295025e-06 3.0081659348632982e-06
Visual cortex 2.718664477285167 0.00022251941721995738 0.005817254505335878 0.0001636978984108639 0.0008182215658975034 4.759038047119881e-06 1.6010359725771003e-06
Cytoplasm 1.342677579149467 0.0007015483476900952 0.006697828886803592 0.0006236479773304993 0.0018697773641522808 4.8235130571715385e-06 3.4401634350601048e-06
Acetylation 1.390641487251084 0.0013623199776553463 0.013414099089470444 0.0009366445669947154 0.0037413177358246452 9.660607899125942e-06 6.682569726238242e-06
Kidney 1.4292407537727736 0.0011550837223046617 0.014923271075939493 0.0003499348103087607 0.0020977729030764447 1.2209090065533015e-05 8.314723314991709e-06
Golgi apparatus 1.8385942076147088 0.005012978980333815 0.06703108622759801 0.0037401245263462 0.018561259527838603 4.8286672830732675e-05 2.4634922584523394e-05
Salivary gland 1.8430426716141002 0.008603386558311055 0.14620656673336452 0.0029367433156282097 0.020376973397311815 0.00011968730232588509 6.216072504173824e-05
Go:0005739~mitochondrion 1.461453605648008 0.024295613581143627 0.2996297588236829 0.027860570646440097 0.08127470344153997 0.00021567169350106817 0.00013973808353611597
Eye 1.4397492685489641 0.02432103481123149 0.32127989603526474 0.0056439304613777885 0.044269530117283296 0.0002632173345110476 0.00017711867082262535
Go:0031201~snare complex 13.567708333333334 0.038613905348805266 0.3709937856060441 0.025907305407891434 0.09967119503568866 0.0002671277845566093 1.017019293001842e-05
Go:0008654~phospholipid biosynthetic process 3.494648544918591 0.16125399626286274 0.5123341150351401 0.40106732181268967 0.40106732181268967 0.0003048946627728106 7.612149882530411e-05
Brain 1.1520241808378395 0.03751473361082591 0.38753639661447403 0.0060522002534088015 0.05316960733436649 0.0003175966569555744 0.0002750450500793786
Phospholipid biosynthesis 4.35746827204686 0.12679275696108105 1.2073963220207706 0.05499907359128886 0.28781404361562424 0.0008744015780815131 0.00016614104939798044
Go:0005856~cytoskeleton 1.4510918003565063 0.1017572610526728 1.291601191779257 0.07081467138361397 0.3073533797717233 0.0009340046079184327 0.0006095581017451592
Amnion 2.0139208001081226 0.062533666777568 1.212738685160386 0.01702194837244486 0.15775545239089095 0.0009976698468676399 0.00046445637300159226
Go:0016192~vesicle-mediated transport 1.7715526050585988 0.16201760765775464 1.6701958399334083 0.5684781691905159 0.813788909534831 0.0009994254964168993 0.0005354874549211238
Hippocampus 1.469091984619935 0.11301550671360427 1.5766970719435114 0.020123941669996204 0.2003819081469227 0.0012992775935669815 0.0008624176811002826

TFBS Enrichment 10 Kb Upstream and 1 Kb Downstream

Please click the link for the full table of TFBS enrichment results

Positively Enriched, Up

TFBS Enrichment for Differentially Expressed Genes Up in KO
TF P-Value
Ctcf_(sc-15914) 3.46792918002e-23
Rad21 4.94810295276e-20
Gata-1 1.17734588643e-14
Bhlhe40_(nb100-1800) 2.9217054127e-14
Smc3_(ab9263) 1.1783240947e-13
Ctcf 5.94395127873e-12
P300_(sc-584) 8.98352215529e-11
Maz_(ab85725) 5.69152900787e-10
Hnf4a 1.55671894486e-09
Pol2-4h8 6.67135804713e-09
Ets1 1.31285232463e-08
Max 2.338484487e-08
Pparg 6.14024337257e-08
Pol2 8.61073052747e-08
Mafk_(ab50322) 9.70152440032e-08
Jund 3.63364588938e-07
Srebf2 1.20748826279e-06
Myod_(sc-32758) 1.23684498703e-06
Gata1_(sc-265) 1.56697657792e-06
P300 3.70087703356e-06
C-myc 3.79979687535e-06
Znf384_(hpa004051) 5.76239706146e-06
Chd2_(ab68301) 7.78676318301e-06
Pol2(phosphos2) 9.08630240572e-06
Sin3a_(nb600-1263) 1.00400075675e-05

Positively Enriched, Down

TFBS Enrichment for Differentially Expressed Genes Down in KO

TF P-Value
Gata-1 2.40654467695e-20
Ctcf_(sc-15914) 3.31300190158e-14
Pol2 2.20643366772e-13
Max 1.48018471705e-12
Bhlhe40_(nb100-1800) 3.21420481312e-11
Znf384_(hpa004051) 7.53980481534e-11
P300 9.10440078815e-11
Usf2 7.91524845235e-10
Ctcf 1.81766764257e-09
Maz_(ab85725) 5.00159471235e-09
Rad21 6.88894768993e-09
C-myc 7.09484402028e-09
Sin3a_(nb600-1263) 5.39687323347e-08
Chd2_(ab68301) 8.90520420959e-08
Pol2-4h8 1.97111906851e-07
Corest_(sc-30189) 2.42457105087e-07
Srebf2 5.90427992586e-07
Hnf4a 6.40242512566e-07
Pparg 1.04216986459e-06
Gcn5 1.10733331703e-06
Srebp1 1.92725524512e-06
Tbp 2.26400227914e-06
Mxi1_(af4185) 3.41082601471e-06
Nelfe 4.73637169932e-06
Zkscan1_(hpa006672) 7.04848287817e-06

List of Differentially Expressed Genes and TFs

Please click the link for the full list of searchable genes.



1029 Genes Mapped Down in KO

Genes Down in KO Condition


Sorted Down Genes - Excel Download (by p-value)

669 Genes Mapped Up in KO

Genes Up in KO Condition


Sorted Up Genes - Excel Download (by p-value)

124 Transcription Factors Down in KO

Ndnl2 Sp6 Mier2 Med9 Ddx54 Pim2 Zfp653 Zfp771
Yeats2 Ercc2 Skap1 Zfp263 Prmt5 Baz1b Zfp629 Zfp579
Sfswap Nat14 Psmd9 Nrf1 Rnf8 Batf Rhog Habp4
Mapk8ip1 Ehmt1 Bhlha15 Zbed3 Thap11 Smyd2 Zfp664 Zfp580
Zfp740 Tcea2 Vps72 Dnmt3a Nkx6-2 Atf5 Pbx4 Cby1
Gtf2h3 Pelp1 Tnip1 Arhgef2 Hnrnpab Zfhx2 Sirt7 Sox13
Gas6 Litaf Ncoa5 Brms1 Sin3b Zscan20 Sp7 Gps2
Zfp688 Zfp524 Zfp821 H2afy Zbtb24 Banp Emx1 Eaf2
Dedd Zfp239 Pdlim1 Batf3 Csnk2a2 Tfeb Nelfb Ablim2
Zfp46 Uhrf1 Hdac11 Cbx6 Mapk11 Cenpb Hdgf Trp53inp2
Olig1 Psrc1 Neurod2 Esrra Tbx21 Mybbp1a Dusp26 Zfp784
Med20 Med22 Il1a Dvl1 Actl6a Dlx4 Ccdc101 Nr2f1
Cnot8 Dmap1 Trf Bcl11a Neurog2 Kat2a Coprs Pkig
Safb Rfxank Zfp423 Gtf2i Wnt4 Alkbh4 Lime1 Ell
Zbtb49 Ss18 Preb Nr1h2 Ccnt2 Irx1 Ttc5 Sfrp2
Chaf1a Nck2 Pcbd1 Suv39h3

93 Transcription Factors Up in KO

Cand1 Sp1 Drd2 Topors Dhx36 Ehf Ptprk Zfp712
Hexb Heyl Runx1t1 Mtdh Dnttip2 Ctnnd1 Rfc1 Gm4944
Foxo1 Zfp473 Zfp748 Gm6592 Gli3 Pcgf5 Rad21 Pou2f1
Zbtb16 Slc11a1 Nr4a3 Pbx1 Ciita Stat5a Pias1 Phf8
Sox11 Rb1 Lrp6 Zfp72 Sertad2 Ikzf2 Mef2a Ddx3x
Zfp458 Nkrf Mc1r Bmpr1a Mecp2 Sfpq Zfp281 Rbm15
Fosl1 Cdc73 2610305d13rik Nfe2l2 Sox5 Ikzf5 Tlr2 Trp53inp1
Zfp169 Hmbox1 Tfcp2l1 Ebf1 Prrx1 Zfp516 Xrn2 Zfp937
1700049g17rik Chd1 Mina Cep290 Ets2 Bcl6b Kdm4c Mapk1
Zfp292 Fzd4 Zfp110 Pkn2 Crebrf Trib3 Wnt1 Zfp800
Zkscan7 Jmy Arid2 Bbs7 A530054k11rik Pitx1 Ikbkg Zhx3
Nos1 Zfp597 Tle4 Map2k6 Rora

MiRNA (SmallRNA) Enrichment

Contains enrichment excels for all MicroRNA (3p/5p)


MicroRNAEnrichment - Up
MicroRNAEnrichment - Down

Triple Intersection Venn

Updated MicroRNA Targets

mmu-let-7g-5p mmu-let-7g-3p mmu-let-7i-5p mmu-let-7i-3p mmu-miR-1a-1-5p mmu-miR-1a-3p mmu-miR-15b-5p mmu-miR-15b-3p mmu-miR-23b-5p
mmu-miR-23b-3p mmu-miR-27b-5p mmu-miR-27b-3p mmu-miR-29b-1-5p mmu-miR-29b-3p mmu-miR-30a-5p mmu-miR-30a-3p mmu-miR-30b-5p mmu-miR-30b-3p
mmu-miR-99a-5p mmu-miR-99a-3p mmu-miR-99b-5p mmu-miR-99b-3p mmu-miR-101a-5p mmu-miR-101a-3p mmu-miR-124-5p mmu-miR-124-3p mmu-miR-125a-5p
mmu-miR-125a-3p mmu-miR-125b-5p mmu-miR-125b-2-3p mmu-miR-127-5p mmu-miR-127-3p mmu-miR-128-1-5p mmu-miR-128-3p mmu-miR-130a-5p mmu-miR-130a-3p
mmu-miR-9-5p mmu-miR-9-3p mmu-miR-132-5p mmu-miR-132-3p mmu-miR-133a-5p mmu-miR-133a-3p mmu-miR-134-5p mmu-miR-134-3p mmu-miR-135a-5p
mmu-miR-135a-1-3p mmu-miR-136-5p mmu-miR-136-3p mmu-miR-137-5p mmu-miR-137-3p mmu-miR-138-5p mmu-miR-138-2-3p mmu-miR-140-5p mmu-miR-140-3p
mmu-miR-141-5p mmu-miR-141-3p mmu-miR-144-5p mmu-miR-144-3p mmu-miR-146a-5p mmu-miR-146a-3p mmu-miR-149-5p mmu-miR-149-3p mmu-miR-150-5p
mmu-miR-150-3p mmu-miR-151-5p mmu-miR-151-3p mmu-miR-152-3p mmu-miR-153-5p mmu-miR-153-3p mmu-miR-154-5p mmu-miR-154-3p mmu-miR-155-5p
mmu-miR-155-3p mmu-miR-10b-5p mmu-miR-10b-3p mmu-miR-129-5p mmu-miR-129-1-3p mmu-miR-181a-5p mmu-miR-182-5p mmu-miR-182-3p mmu-miR-183-5p
mmu-miR-183-3p mmu-miR-184-5p mmu-miR-184-3p mmu-miR-185-5p mmu-miR-185-3p mmu-miR-186-5p mmu-miR-186-3p mmu-miR-187-5p mmu-miR-187-3p
mmu-miR-188-5p mmu-miR-188-3p mmu-miR-24-1-5p mmu-miR-24-3p mmu-miR-191-5p mmu-miR-191-3p mmu-miR-194-5p mmu-miR-194-1-3p mmu-miR-199a-5p
mmu-miR-199a-3p mmu-miR-200b-5p mmu-miR-200b-3p mmu-miR-201-5p mmu-miR-202-5p mmu-miR-202-3p mmu-miR-203-5p mmu-miR-203-3p mmu-miR-204-5p
mmu-miR-204-3p mmu-miR-205-5p mmu-miR-205-3p mmu-miR-206-5p mmu-miR-206-3p mmu-miR-207 mmu-miR-122-5p mmu-miR-122-3p mmu-miR-143-5p
mmu-miR-143-3p mmu-miR-30e-5p mmu-miR-30e-3p mmu-miR-291a-5p mmu-miR-291a-3p mmu-miR-293-5p mmu-miR-293-3p mmu-miR-294-5p mmu-miR-294-3p
mmu-miR-295-5p mmu-miR-295-3p mmu-miR-296-5p mmu-miR-296-3p mmu-miR-298-5p mmu-miR-300-5p mmu-miR-300-3p mmu-miR-301a-5p mmu-miR-301a-3p
mmu-miR-302a-5p mmu-miR-302a-3p mmu-miR-34c-5p mmu-miR-34c-3p mmu-miR-34b-5p mmu-miR-34b-3p mmu-let-7d-5p mmu-let-7d-3p mmu-miR-106a-5p
mmu-miR-106a-3p mmu-miR-106b-5p mmu-miR-106b-3p mmu-miR-130b-5p mmu-miR-130b-3p mmu-miR-19b-2-5p mmu-miR-19b-3p mmu-miR-30c-5p mmu-miR-30c-1-3p
mmu-miR-30c-2-3p mmu-miR-30d-5p mmu-miR-30d-3p mmu-miR-148a-5p mmu-miR-148a-3p mmu-miR-192-5p mmu-miR-192-3p mmu-miR-196a-5p mmu-miR-196a-2-3p
mmu-miR-200a-5p mmu-miR-200a-3p mmu-miR-208a-5p mmu-miR-208a-3p mmu-let-7a-5p mmu-let-7a-1-3p mmu-let-7a-2-3p mmu-let-7b-5p mmu-let-7b-3p
mmu-let-7c-5p mmu-let-7c-1-3p mmu-let-7c-2-3p mmu-let-7e-5p mmu-let-7e-3p mmu-let-7f-5p mmu-let-7f-1-3p mmu-let-7f-2-3p mmu-miR-15a-5p
mmu-miR-15a-3p mmu-miR-16-5p mmu-miR-16-1-3p mmu-miR-16-2-3p mmu-miR-18a-5p mmu-miR-18a-3p mmu-miR-20a-5p mmu-miR-20a-3p mmu-miR-22-5p
mmu-miR-22-3p mmu-miR-23a-5p mmu-miR-23a-3p mmu-miR-24-2-5p mmu-miR-26a-5p mmu-miR-26a-1-3p mmu-miR-26b-5p mmu-miR-26b-3p mmu-miR-29a-5p
mmu-miR-29a-3p mmu-miR-29c-5p mmu-miR-29c-3p mmu-miR-27a-5p mmu-miR-27a-3p mmu-miR-31-5p mmu-miR-31-3p mmu-miR-92a-2-5p mmu-miR-92a-3p
mmu-miR-93-5p mmu-miR-93-3p mmu-miR-96-5p mmu-miR-96-3p mmu-miR-34a-5p mmu-miR-34a-3p mmu-miR-129-2-3p mmu-miR-98-5p mmu-miR-98-3p
mmu-miR-103-1-5p mmu-miR-103-3p mmu-miR-103-2-5p mmu-miR-322-5p mmu-miR-322-3p mmu-miR-323-5p mmu-miR-323-3p mmu-miR-324-5p mmu-miR-324-3p
mmu-miR-325-5p mmu-miR-325-3p mmu-miR-326-5p mmu-miR-326-3p mmu-miR-328-5p mmu-miR-328-3p mmu-miR-329-5p mmu-miR-329-3p mmu-miR-330-5p
mmu-miR-330-3p mmu-miR-331-5p mmu-miR-331-3p mmu-miR-337-5p mmu-miR-337-3p mmu-miR-148b-5p mmu-miR-148b-3p mmu-miR-338-5p mmu-miR-338-3p
mmu-miR-339-5p mmu-miR-339-3p mmu-miR-340-5p mmu-miR-340-3p mmu-miR-341-3p mmu-miR-342-5p mmu-miR-342-3p mmu-miR-344-3p mmu-miR-345-5p
mmu-miR-345-3p mmu-miR-346-5p mmu-miR-346-3p mmu-miR-350-5p mmu-miR-350-3p mmu-miR-351-5p mmu-miR-135b-5p mmu-miR-135b-3p mmu-miR-101b-5p
mmu-miR-101b-3p mmu-miR-1a-2-5p mmu-miR-107-5p mmu-miR-107-3p mmu-miR-10a-5p mmu-miR-10a-3p mmu-miR-17-5p mmu-miR-17-3p mmu-miR-19a-5p
mmu-miR-19a-3p mmu-miR-25-5p mmu-miR-25-3p mmu-miR-32-5p mmu-miR-32-3p mmu-miR-100-5p mmu-miR-100-3p mmu-miR-139-5p mmu-miR-139-3p
mmu-miR-200c-5p mmu-miR-200c-3p mmu-miR-210-5p mmu-miR-210-3p mmu-miR-212-5p mmu-miR-212-3p mmu-miR-181a-1-3p mmu-miR-214-5p mmu-miR-214-3p
mmu-miR-216a-5p mmu-miR-216a-3p mmu-miR-218-5p mmu-miR-218-1-3p mmu-miR-218-2-3p mmu-miR-223-5p mmu-miR-223-3p mmu-miR-320-5p mmu-miR-320-3p
mmu-miR-26a-2-3p mmu-miR-33-5p mmu-miR-33-3p mmu-miR-211-5p mmu-miR-221-5p mmu-miR-221-3p mmu-miR-222-5p mmu-miR-222-3p mmu-miR-224-5p
mmu-miR-199b-5p mmu-miR-199b-3p mmu-miR-135a-2-3p mmu-miR-19b-1-5p mmu-miR-92a-1-5p mmu-miR-138-1-3p mmu-miR-181b-5p mmu-miR-181b-1-3p mmu-miR-181c-5p
mmu-miR-181c-3p mmu-miR-125b-1-3p mmu-miR-7a-5p mmu-miR-7a-1-3p mmu-miR-7a-2-3p mmu-miR-7b-5p mmu-miR-7b-3p mmu-miR-217-5p mmu-miR-217-3p
mmu-miR-194-2-3p mmu-miR-361-5p mmu-miR-361-3p mmu-miR-362-5p mmu-miR-362-3p mmu-miR-363-5p mmu-miR-363-3p mmu-miR-365-1-5p mmu-miR-365-3p
mmu-miR-375-3p mmu-miR-376a-5p mmu-miR-376a-3p mmu-miR-377-5p mmu-miR-377-3p mmu-miR-379-5p mmu-miR-379-3p mmu-miR-380-5p mmu-miR-380-3p
mmu-miR-381-5p mmu-miR-381-3p mmu-miR-382-5p mmu-miR-382-3p mmu-miR-383-5p mmu-miR-383-3p mmu-miR-335-5p mmu-miR-335-3p mmu-miR-133b-5p
mmu-miR-133b-3p mmu-miR-181b-2-3p mmu-miR-215-5p mmu-miR-384-5p mmu-miR-384-3p mmu-miR-196b-5p mmu-miR-196b-3p mmu-miR-409-5p mmu-miR-409-3p
mmu-miR-410-5p mmu-miR-410-3p mmu-miR-376b-5p mmu-miR-376b-3p mmu-miR-411-5p mmu-miR-411-3p mmu-miR-412-5p mmu-miR-412-3p mmu-miR-370-3p
mmu-miR-425-5p mmu-miR-425-3p mmu-miR-431-5p mmu-miR-431-3p mmu-miR-433-5p mmu-miR-433-3p mmu-miR-434-5p mmu-miR-434-3p mmu-miR-448-5p
mmu-miR-448-3p mmu-miR-429-5p mmu-miR-429-3p mmu-miR-365-2-5p mmu-miR-449a-5p mmu-miR-449a-3p mmu-miR-450a-5p mmu-miR-450a-1-3p mmu-miR-452-5p
mmu-miR-452-3p mmu-miR-463-5p mmu-miR-465a-5p mmu-miR-465a-3p mmu-miR-466a-5p mmu-miR-466a-3p mmu-miR-467a-5p mmu-miR-467a-3p mmu-miR-468-5p
mmu-miR-468-3p mmu-miR-470-5p mmu-miR-471-5p mmu-miR-471-3p mmu-miR-532-5p mmu-miR-532-3p mmu-miR-489-5p mmu-miR-489-3p mmu-miR-483-5p
mmu-miR-483-3p mmu-miR-484 mmu-miR-485-5p mmu-miR-485-3p mmu-miR-546 mmu-miR-540-5p mmu-miR-540-3p mmu-miR-543-3p mmu-miR-539-5p
mmu-miR-539-3p mmu-miR-541-5p mmu-miR-542-5p mmu-miR-542-3p mmu-miR-547-3p mmu-miR-367-5p mmu-miR-367-3p mmu-miR-494-5p mmu-miR-494-3p
mmu-miR-376c-5p mmu-miR-376c-3p mmu-miR-487b-5p mmu-miR-487b-3p mmu-miR-369-5p mmu-miR-369-3p mmu-miR-20b-5p mmu-miR-20b-3p mmu-miR-450a-2-3p
mmu-miR-503-5p mmu-miR-503-3p mmu-miR-291b-5p mmu-miR-291b-3p mmu-miR-302b-5p mmu-miR-302b-3p mmu-miR-302c-5p mmu-miR-302c-3p mmu-miR-302d-5p
mmu-miR-302d-3p mmu-miR-1224-3p mmu-miR-1247-3p mmu-miR-301b-5p mmu-miR-301b-3p mmu-miR-675-5p mmu-miR-675-3p mmu-miR-744-5p mmu-miR-744-3p
mmu-miR-216b-5p mmu-miR-592-5p mmu-miR-758-5p mmu-miR-758-3p mmu-miR-1264-5p mmu-miR-1264-3p mmu-miR-551b-5p mmu-miR-551b-3p mmu-miR-1249-5p
mmu-miR-671-5p mmu-miR-671-3p mmu-miR-668-5p mmu-miR-668-3p mmu-miR-665-5p mmu-miR-665-3p mmu-miR-667-3p mmu-miR-770-5p mmu-miR-770-3p
mmu-miR-762 mmu-miR-344d-3p mmu-miR-802-5p mmu-miR-802-3p mmu-miR-672-5p mmu-miR-670-5p mmu-miR-670-3p mmu-miR-1298-5p mmu-miR-761
mmu-miR-764-5p mmu-miR-764-3p mmu-miR-3059-5p mmu-miR-3058-5p mmu-miR-3099-5p mmu-miR-3106-5p mmu-miR-763 mmu-miR-669a-5p mmu-miR-669a-3p
mmu-miR-666-5p mmu-miR-666-3p mmu-miR-759 mmu-miR-673-5p mmu-miR-673-3p mmu-miR-760-5p mmu-miR-760-3p mmu-miR-674-5p mmu-miR-674-3p
mmu-miR-344d-2-5p mmu-miR-488-5p mmu-miR-488-3p mmu-miR-677-5p mmu-miR-678 mmu-miR-423-5p mmu-miR-423-3p mmu-miR-679-5p mmu-miR-679-3p
mmu-miR-495-5p mmu-miR-495-3p mmu-miR-680 mmu-miR-681 mmu-miR-682 mmu-miR-449c-5p mmu-miR-449c-3p mmu-miR-683 mmu-miR-684
mmu-miR-686 mmu-miR-719 mmu-miR-687 mmu-miR-688 mmu-miR-690 mmu-miR-691 mmu-miR-692 mmu-miR-693-5p mmu-miR-693-3p
mmu-miR-694 mmu-miR-146b-5p mmu-miR-146b-3p mmu-miR-669b-5p mmu-miR-669a-3-3p mmu-miR-467b-5p mmu-miR-467b-3p mmu-miR-669c-3p mmu-miR-297b-5p
mmu-miR-297b-3p mmu-miR-695 mmu-miR-499-5p mmu-miR-499-3p mmu-miR-696 mmu-miR-455-5p mmu-miR-455-3p mmu-miR-491-5p mmu-miR-491-3p
mmu-miR-697 mmu-miR-700-5p mmu-miR-701-5p mmu-miR-703 mmu-miR-704 mmu-miR-705 mmu-miR-706 mmu-miR-707 mmu-miR-708-5p
mmu-miR-708-3p mmu-miR-709 mmu-miR-710 mmu-miR-711 mmu-miR-712-5p mmu-miR-712-3p mmu-miR-713 mmu-miR-714 mmu-miR-500-3p
mmu-miR-501-5p mmu-miR-501-3p mmu-miR-717 mmu-miR-450b-5p mmu-miR-450b-3p mmu-miR-505-5p mmu-miR-505-3p mmu-miR-718 mmu-miR-721
mmu-miR-652-5p mmu-miR-652-3p mmu-miR-490-5p mmu-miR-490-3p mmu-miR-676-5p mmu-miR-676-3p mmu-miR-615-5p mmu-miR-615-3p mmu-miR-804
mmu-miR-741-3p mmu-miR-742-5p mmu-miR-742-3p mmu-miR-743a-5p mmu-miR-743a-3p mmu-miR-181d-5p mmu-miR-181d-3p mmu-miR-743b-5p mmu-miR-743b-3p
mmu-miR-871-5p mmu-miR-871-3p mmu-miR-879-5p mmu-miR-879-3p mmu-miR-880-5p mmu-miR-880-3p mmu-miR-881-5p mmu-miR-881-3p mmu-miR-882
mmu-miR-883a-5p mmu-miR-883a-3p mmu-miR-883b-5p mmu-miR-883b-3p mmu-miR-190b-5p mmu-miR-190b-3p mmu-miR-874-3p mmu-miR-876-5p mmu-miR-876-3p
mmu-miR-105 mmu-miR-147-5p mmu-miR-147-3p mmu-miR-18b-5p mmu-miR-18b-3p mmu-miR-193b-5p mmu-miR-193b-3p mmu-miR-297a-3p mmu-miR-297c-5p
mmu-miR-297c-3p mmu-miR-327 mmu-miR-343 mmu-miR-421-3p mmu-miR-453 mmu-miR-465b-5p mmu-miR-465b-3p mmu-miR-465c-5p mmu-miR-465c-3p
mmu-miR-466b-5p mmu-miR-466b-3p mmu-miR-466c-5p mmu-miR-466c-3p mmu-miR-466e-5p mmu-miR-466e-3p mmu-miR-466f-5p mmu-miR-466f-3p mmu-miR-466g
mmu-miR-466h-5p mmu-miR-466h-3p mmu-miR-467c-5p mmu-miR-467c-3p mmu-miR-467d-5p mmu-miR-467d-3p mmu-miR-493-5p mmu-miR-493-3p mmu-miR-504-5p
mmu-miR-504-3p mmu-miR-509-5p mmu-miR-509-3p mmu-miR-568 mmu-miR-574-5p mmu-miR-574-3p mmu-miR-590-5p mmu-miR-590-3p mmu-miR-654-5p
mmu-miR-654-3p mmu-miR-92b-5p mmu-miR-92b-3p mmu-miR-466d-5p mmu-miR-466d-3p mmu-miR-449b mmu-miR-878-5p mmu-miR-878-3p mmu-miR-872-5p
mmu-miR-872-3p mmu-miR-875-5p mmu-miR-875-3p mmu-miR-208b-5p mmu-miR-208b-3p mmu-miR-877-5p mmu-miR-877-3p mmu-miR-511-5p mmu-miR-511-3p
mmu-miR-544-5p mmu-miR-544-3p mmu-miR-598-3p mmu-miR-653-5p mmu-miR-653-3p mmu-miR-582-5p mmu-miR-582-3p mmu-miR-467e-3p mmu-miR-466l-5p
mmu-miR-466l-3p mmu-miR-669k-3p mmu-miR-669g mmu-miR-669d-5p mmu-miR-466i-5p mmu-miR-466i-3p mmu-miR-1b-5p mmu-miR-1187 mmu-miR-669j
mmu-miR-669f-5p mmu-miR-669f-3p mmu-miR-669i mmu-miR-669h-5p mmu-miR-669h-3p mmu-miR-1188-5p mmu-miR-466f mmu-miR-466k mmu-miR-467f
mmu-miR-1190 mmu-miR-466j mmu-miR-1192 mmu-miR-1193-5p mmu-miR-1193-3p mmu-miR-1194 mmu-miR-669e-5p mmu-miR-467g mmu-miR-467h
mmu-miR-1195 mmu-miR-1197-5p mmu-miR-1198-5p mmu-miR-1198-3p mmu-miR-1902 mmu-miR-1897-5p mmu-miR-1897-3p mmu-miR-1905 mmu-miR-1895
mmu-miR-1903 mmu-miR-1899 mmu-miR-1900 mmu-miR-1892 mmu-miR-1906 mmu-miR-1896 mmu-miR-1904 mmu-miR-1898 mmu-miR-1907
mmu-miR-1894-5p mmu-miR-1894-3p mmu-miR-1893 mmu-miR-1901 mmu-miR-1927 mmu-miR-1928 mmu-miR-1929-3p mmu-miR-1930-3p mmu-miR-1931
mmu-miR-1932 mmu-miR-1933-5p mmu-miR-1933-3p mmu-miR-1934-5p mmu-miR-1936 mmu-miR-1938 mmu-miR-1941-5p mmu-miR-1941-3p mmu-miR-1942
mmu-miR-1943-5p mmu-miR-1945 mmu-miR-1306-5p mmu-miR-1306-3p mmu-miR-1946a mmu-miR-1947-3p mmu-miR-1949 mmu-miR-1950 mmu-miR-669l-3p
mmu-miR-669m-5p mmu-miR-669m-3p mmu-miR-669o-5p mmu-miR-669o-3p mmu-miR-1951 mmu-miR-1952 mmu-miR-1953 mmu-miR-1954 mmu-miR-1955-5p
mmu-miR-1955-3p mmu-miR-669n mmu-miR-1956 mmu-miR-1958 mmu-miR-1960 mmu-miR-1961 mmu-miR-1962 mmu-miR-1963 mmu-miR-1964-5p
mmu-miR-1964-3p mmu-miR-1967 mmu-miR-1968-5p mmu-miR-1969 mmu-miR-1946b mmu-miR-1970 mmu-miR-1971 mmu-miR-1983 mmu-miR-1839-5p
mmu-miR-1839-3p mmu-miR-1982-5p mmu-miR-2136 mmu-miR-2137 mmu-miR-2139 mmu-miR-2183 mmu-miR-432 mmu-miR-599 mmu-miR-767
mmu-miR-664-3p mmu-miR-2861 mmu-miR-3057-5p mmu-miR-3057-3p mmu-miR-1251-5p mmu-miR-3060-5p mmu-miR-3061-5p mmu-miR-3061-3p mmu-miR-3063-3p
mmu-miR-3064-5p mmu-miR-3064-3p mmu-miR-3065-5p mmu-miR-3066-5p mmu-miR-3067-5p mmu-miR-3068-3p mmu-miR-3069-5p mmu-miR-3069-3p mmu-miR-3071-5p
mmu-miR-3072-3p mmu-miR-3074-5p mmu-miR-3074-1-3p mmu-miR-3075-3p mmu-miR-3076-5p mmu-miR-3076-3p mmu-miR-3077-5p mmu-miR-3078-5p mmu-miR-3079-5p
mmu-miR-3079-3p mmu-miR-3080-5p mmu-miR-3080-3p mmu-miR-3081-5p mmu-miR-3082-5p mmu-miR-3082-3p mmu-miR-3083-5p mmu-miR-3084-3p mmu-miR-3085-5p
mmu-miR-3085-3p mmu-miR-3086-5p mmu-miR-3086-3p mmu-miR-466m-5p mmu-miR-466m-3p mmu-miR-669d-2-3p mmu-miR-466o-5p mmu-miR-466o-3p mmu-miR-466p-5p
mmu-miR-466p-3p mmu-miR-466n-5p mmu-miR-466n-3p mmu-miR-3087-5p mmu-miR-3088-3p mmu-miR-3089-5p mmu-miR-3089-3p mmu-miR-3090-5p mmu-miR-3091-5p
mmu-miR-3091-3p mmu-miR-3092-5p mmu-miR-3093-5p mmu-miR-3093-3p mmu-miR-3094-3p mmu-miR-3095-5p mmu-miR-3095-3p mmu-miR-3097-5p mmu-miR-3097-3p
mmu-miR-3098-5p mmu-miR-3098-3p mmu-miR-3100-5p mmu-miR-3100-3p mmu-miR-3101-3p mmu-miR-344e-3p mmu-miR-344c-3p mmu-miR-344g-5p mmu-miR-344g-3p
mmu-miR-344f-5p mmu-miR-344f-3p mmu-miR-3102-5p mmu-miR-3102-5p.2-5p mmu-miR-3102-3p.2-3p mmu-miR-3102-3p mmu-miR-3103-5p mmu-miR-3104-5p mmu-miR-3104-3p
mmu-miR-3105-5p mmu-miR-3105-3p mmu-miR-3074-2-3p mmu-miR-3108-5p mmu-miR-3109-3p mmu-miR-3110-5p mmu-miR-374c-5p mmu-miR-1912-3p mmu-miR-3113-3p
mmu-miR-3470a mmu-miR-3470b mmu-miR-3471 mmu-miR-3472 mmu-miR-3474 mmu-miR-3960 mmu-miR-3961 mmu-miR-28c mmu-miR-3962
mmu-miR-3963 mmu-miR-3964 mmu-miR-1843b-5p mmu-miR-1843b-3p mmu-miR-3965 mmu-miR-378b mmu-miR-101c mmu-miR-3966 mmu-miR-3967
mmu-miR-3968 mmu-miR-3969 mmu-miR-28b mmu-miR-3970 mmu-miR-3971 mmu-miR-3473b mmu-miR-5046 mmu-miR-5098 mmu-miR-5099
mmu-miR-5100 mmu-miR-5101 mmu-miR-5103 mmu-miR-5104 mmu-miR-5106 mmu-miR-3473c mmu-miR-5108 mmu-miR-5110 mmu-miR-5112
mmu-miR-5113 mmu-miR-5114 mmu-miR-5116 mmu-miR-5118 mmu-miR-5119 mmu-miR-5120 mmu-miR-5121 mmu-miR-5122 mmu-miR-466q
mmu-miR-3473d mmu-miR-5123 mmu-miR-5125 mmu-miR-5126 mmu-miR-5127 mmu-miR-5128 mmu-miR-5130 mmu-miR-5131 mmu-miR-5133
mmu-miR-5135 mmu-miR-3544-5p mmu-miR-3544-3p mmu-miR-299b-5p mmu-miR-299b-3p mmu-miR-5615-5p mmu-miR-5615-3p mmu-miR-1231-5p mmu-miR-1231-3p
mmu-miR-5616-5p mmu-miR-5616-3p mmu-miR-5617-5p mmu-miR-5617-3p mmu-miR-5618-5p mmu-miR-5619-5p mmu-miR-5619-3p mmu-miR-5620-5p mmu-miR-5620-3p
mmu-miR-5621-5p mmu-miR-5621-3p mmu-miR-5622-5p mmu-miR-5622-3p mmu-miR-5623-5p mmu-miR-5623-3p mmu-miR-3073b-5p mmu-miR-3073b-3p mmu-miR-5624-5p
mmu-miR-5624-3p mmu-miR-5625-5p mmu-miR-5625-3p mmu-miR-5626-5p mmu-miR-5626-3p mmu-miR-344h-5p mmu-miR-5627-5p mmu-miR-5627-3p mmu-miR-344i
mmu-miR-5710 mmu-miR-935

MiRNA Target Networks

Differentially expressed genes with counts (and list) of MiRNA targeters. Sorted by count of MiRNAs. Minimum 2 MiRNA for each gene.

Up Genes Target Counts
Down Genes Target Counts

Differentially expressed genes (up and down) targeted by atleast 2 differentially expressed MiRNA (down and up, respectively)

P-value 0.001
P10-WT vs P28-WT (Up)
P10-KO vs P28-KO (Up)
P10-KO_P28-KO (Down)
P10-WT_P28-WT (Down)
P28L-KO_P28-KO (Up)