Basic Statistics
Measure | Value |
---|---|
Filename | 26682_ID1144_2_S10_L004_R1_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17064085 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTGTGC | 10555 | 0.0 | 29.776909 | 1 |
CGTTGAT | 2745 | 0.0 | 20.991186 | 1 |
TCTTCCG | 15000 | 0.0 | 20.77298 | 8 |
TCCGATC | 8710 | 0.0 | 19.723078 | 7 |
CTTCCGA | 16630 | 0.0 | 19.25949 | 9 |
TTCCGAT | 9195 | 0.0 | 18.820927 | 6 |
CCGATCT | 9855 | 0.0 | 17.54589 | 8 |
CGATCTA | 2645 | 0.0 | 17.110662 | 9 |
GTGTGCT | 21780 | 0.0 | 14.364961 | 2 |
GTGCTCT | 22740 | 0.0 | 13.963112 | 4 |
TGTGCTC | 23760 | 0.0 | 13.094455 | 3 |
CTAGATA | 4535 | 0.0 | 12.951621 | 2 |
TAATCGT | 1595 | 0.0 | 12.771782 | 1 |
ACTAGAT | 4325 | 0.0 | 11.976998 | 1 |
TGCTCTT | 27720 | 0.0 | 11.559484 | 5 |
CGATCTC | 5450 | 0.0 | 11.285612 | 8 |
ATATCGG | 3860 | 0.0 | 10.97018 | 28-29 |
TCGTTGA | 2100 | 0.0 | 10.80004 | 4 |
TAGATAC | 5220 | 0.0 | 10.249373 | 3 |
GCTCTTC | 31435 | 0.0 | 10.1607485 | 6 |