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26684_ID1144_4_S51_L006_R1_001.fastq.gz FastQC Report
FastQCFastQC Report
Sat 1 Dec 2018
26684_ID1144_4_S51_L006_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename26684_ID1144_4_S51_L006_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3613292
Sequences flagged as poor quality0
Sequence length125
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGTGC30650.046.6516571
TCTTCCG45700.031.1782078
CTTCCGA48550.028.5108939
GTGTGCT52050.027.3283372
TCCGATC32450.025.7095387
GTGCTCT56300.025.0591134
TTCCGAT33200.024.9691186
CGATCTA7900.024.9260799
TGTGCTC57250.024.74473
CCGATCT34600.024.4404378
TGCTCTT69550.020.1181355
GCTCTTC81850.017.3521236
CGATCTC15150.017.2041058
CGATCTG16900.015.41951912-13
TAATCGT3753.140718E-513.9499841
TCGTTGA4601.0081039E-613.8836184
CGATCTT10950.013.7518589
CTCTTCC119650.012.0568297
GCGGAAT5055.0866156E-410.3471074
CCGAAAT5105.5117154E-410.257341
Produced by FastQC (version 0.11.5)