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26685_ID1144_5_S52_L006_R1_001.fastq.gz FastQC Report
FastQCFastQC Report
Sat 1 Dec 2018
26685_ID1144_5_S52_L006_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename26685_ID1144_5_S52_L006_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3524639
Sequences flagged as poor quality0
Sequence length125
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGTGC48700.073.7168051
TCTTCCG60700.058.5590868
CTTCCGA63250.055.373989
GTGTGCT72050.049.9254532
GTGCTCT74950.048.2251974
TGTGCTC78200.046.0730443
TGCTCTT87050.041.189695
GCTCTTC92950.038.4505586
TCCGATC46650.037.47253410-11
TTCCGAT47550.036.6419410-11
CCGATCT48900.035.27440612-13
CGATCTA11250.033.33175712-13
CGATCTC21750.029.8394412-13
CTCTTCC134150.026.8438937
CGATCTG20650.024.16536912-13
CGATCTT11000.022.28915612-13
CGTGACT9200.018.8815331
CGGGTAA3401.3060437E-515.3083792
CGTTGAT5909.451287E-812.7583691
TTCGATC3805.7146355E-412.1750842
Produced by FastQC (version 0.11.5)