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26686_ID1144_6_S14_L004-R2_001.fastq.gz FastQC Report
FastQCFastQC Report
Sat 1 Dec 2018
26686_ID1144_6_S14_L004-R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename26686_ID1144_6_S14_L004-R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15161508
Sequences flagged as poor quality0
Sequence length125
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC94450.028.273247
ATTACGG46550.026.25058640-41
CCGATCT103350.025.3889688
TTCCGAT112650.023.6119356
CGTGTGC105400.023.0282731
CCCCCGT45050.022.6311071
CGGAATA55300.021.9976544
TTACGGC46250.021.9875742-43
GCGGAAT58200.019.807563
CGGGCTA26600.018.5108011
CGGGGTG128500.017.9869581
AATTACG57750.017.85807240-41
CGGGGGA109350.017.7465521
GGGGGTA146400.017.5683041
CGATCTA20100.017.5398679
TAATTAC76650.016.54479438-39
TCTTCCG162050.016.514874
GTCGGAA76450.016.47534626-27
CTATACT76900.016.31529668-69
CGGGGGG144350.016.1724641
Produced by FastQC (version 0.11.5)