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26686_ID1144_6_S14_L004_R1_001.fastq.gz FastQC Report
FastQCFastQC Report
Sat 1 Dec 2018
26686_ID1144_6_S14_L004_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename26686_ID1144_6_S14_L004_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15161508
Sequences flagged as poor quality0
Sequence length125
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC96150.032.485387
TTCCGAT100250.031.1150286
CCGATCT109000.029.1811378
CGTGTGC94850.027.6432951
CGATCTA27000.022.2748879
CGATCTC56300.021.5703339
TCTTCCG153000.021.4027944
CTTCCGA169050.019.1307725
CGTTGAT24400.017.592621
CGATCTG60250.015.8369979
GTGTGCT192100.014.0595682
TAATCGT14050.013.624681
GTGCTCT211350.012.6418934
TGTGCTC213800.012.6054613
TCGTTGA17500.012.5851684
TGCTCTT267750.012.2624041
CGATCTT37400.011.9059779
GCTCTTC318550.010.5163172
TTGATTA59200.09.1048893
ATATCGG36400.08.49777328-29
Produced by FastQC (version 0.11.5)