Basic Statistics
Measure | Value |
---|---|
Filename | 26686_ID1144_6_S53_L006-R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9879929 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCCGATC | 6140 | 0.0 | 27.490435 | 7 |
ATTACGG | 3340 | 0.0 | 26.980864 | 40-41 |
CCGATCT | 6500 | 0.0 | 25.785189 | 8 |
TTCCGAT | 7195 | 0.0 | 23.145905 | 6 |
CGTGTGC | 6660 | 0.0 | 22.792074 | 1 |
TTACGGC | 3375 | 0.0 | 21.82337 | 42-43 |
CCCCCGT | 2715 | 0.0 | 18.565483 | 1 |
CGGGGGA | 6750 | 0.0 | 18.539875 | 1 |
CTATACT | 5035 | 0.0 | 18.468952 | 68-69 |
CGTAACG | 1000 | 0.0 | 18.196516 | 40-41 |
GCGGAAT | 3705 | 0.0 | 18.13983 | 3 |
TAATTAC | 5100 | 0.0 | 18.122755 | 38-39 |
AATTACG | 4070 | 0.0 | 18.096453 | 40-41 |
GTCGGAA | 5175 | 0.0 | 17.920958 | 26-27 |
CGGAATA | 3620 | 0.0 | 17.764162 | 4 |
GGCAAGT | 9055 | 0.0 | 17.338486 | 4 |
CGGGGGG | 9455 | 0.0 | 17.034918 | 1 |
GGGGGTA | 9215 | 0.0 | 16.975603 | 1 |
CGATCTA | 1175 | 0.0 | 16.723398 | 9 |
GTGTCGG | 5725 | 0.0 | 16.502 | 24-25 |