Basic Statistics
Measure | Value |
---|---|
Filename | 26688_ID1144_8_S62_L007-R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 6452598 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTGGGCAAGTGAGCTTTTTAGTTTGTGTCGGAAGCCTGTAATTACGGCTC | 7539 | 0.1168366602103525 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTGTGC | 5360 | 0.0 | 45.702564 | 1 |
TCTTCCG | 8245 | 0.0 | 29.289677 | 8 |
GTGTGCT | 9195 | 0.0 | 26.704588 | 2 |
ATTACGG | 2435 | 0.0 | 26.085567 | 40-41 |
CTTCCGA | 8820 | 0.0 | 26.003431 | 9 |
GTGCTCT | 9535 | 0.0 | 25.934763 | 4 |
TGTGCTC | 10075 | 0.0 | 24.143845 | 3 |
TTACGGC | 2490 | 0.0 | 22.727068 | 42-43 |
CCCCCGT | 1890 | 0.0 | 22.674355 | 1 |
TCCGATC | 5125 | 0.0 | 22.316587 | 10-11 |
CCGATCT | 5435 | 0.0 | 20.774775 | 12-13 |
TTCCGAT | 5850 | 0.0 | 19.847082 | 10-11 |
CGTAACG | 750 | 0.0 | 19.632948 | 40-41 |
AATTACG | 2930 | 0.0 | 19.01806 | 40-41 |
TGCTCTT | 13010 | 0.0 | 18.917475 | 5 |
GGGGGGT | 10130 | 0.0 | 18.065195 | 1 |
CGGAATA | 2660 | 0.0 | 17.852842 | 4 |
GTCGGAA | 3610 | 0.0 | 17.836222 | 26-27 |
CGGGCTA | 1145 | 0.0 | 17.702213 | 1 |
TAATTAC | 3790 | 0.0 | 17.673613 | 38-39 |